BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D03LP1|AL428533
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1447 1708 0.0
>3x_Contig1447
Length = 7802
Score = 1708 bits (855), Expect = 0.0
Identities = 875/887 (98%), Gaps = 1/887 (0%)
Strand = Plus / Plus
Query: 1 ccaagaattcacaatttgaggctccttccaaaagcttttcgaaagatgcccctccatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2192 ccaagaattcacaatttgaggctccttccaaaagcttttcgaaagatgcccctccatctc 2251
Query: 61 tagtaatgtatgctacagcatggcagttaggatcgaaaaaagactcgcaactttcaccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2252 tagtaatgtatgctacagcatggcagttaggatcgaaaaaagactcgcaactttcaccgc 2311
Query: 121 cgtagtaaatgaaagtctgaatatctttagcatggaaggataatgggaaacccaactgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2312 cgtagtaaatgaaagtctgaatatctttagcatggaaggataatgggaaacccaactgtc 2371
Query: 181 ttcctgcaggaagctcggtaactttaaatgaaagcccgtaatcatgtgttgcgaataagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2372 ttcctgcaggaagctcggtaactttaaatgaaagcccgtaatcatgtgttgcgaataagt 2431
Query: 241 ttttgtttttaccaaatagatatgcagatgagttgaagaaggggttgaaattaatctcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2432 ttttgtttttaccaaatagatatgcagatgagttgaagaaggggttgaaattaatctcta 2491
Query: 301 amatatcttcaccgccagtttgaatttgctttatattttgaccaccatcgtgagacacat 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2492 aaatatcttcaccgccagtttgaatttgctttatattttgaccaccatcgtgagacacat 2551
Query: 361 atgcttcacttttgtctgtcctgamaagaattgattcccgtacgaatgtgtcaaagtatt 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2552 atgcttcacttttgtctgtcctgaaaagaattgattcccgtacgaatgtgtcaaagtatt 2611
Query: 421 gatacgatttgaatatcgatgaaaatttgttttcggtaactttyacattagatggggcag 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2612 gatacgatttgaatatcgatgaaaatttgttttcggtaacttttacattagatggggcag 2671
Query: 481 gtacagcagcgcacgatatctcctctttyatgatattttgtggtctcttacatttagttg 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2672 gtacagcagcgcacgatatctcctcttttatgatattttgtggtctcttacatttagttg 2731
Query: 541 tttttgcatattttcttaggttccaattgamtactcttttyactttcacatttytccatg 600
|||||| ||||||||||||||||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 2732 tttttg-atattttcttaggttccaattgaatactctttttactttcacatttttccatg 2790
Query: 601 agagatgcttttsacaaatctggtacgcatttaccagctgwatcgatggagaaatcatca 660
|||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2791 agagatgcttttgaaaaatctggtacgcatttaccagctgaatcgatggagaaatcatca 2850
Query: 661 gcgcattcgtagtctagttcgctacagccacacaattcttcctcgaaagtgagatctttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2851 gcgcattcgtagtctagttcgctacagccacacaattcttcctcgaaagtgagatctttg 2910
Query: 721 taagtggtcttaattagacattgagcatcttgctttcttctacggaatttgagaatagta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2911 taagtggtcttaattagacattgagcatcttgctttcttctacggaatttgagaatagta 2970
Query: 781 ccgtcaacacattgaccgtyagagtaataccaatcttccatatcagaagttttacagctg 840
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2971 ccgtcaacacattgaccgttagagtaataccaatcttccatatcagaagttttacagctg 3030
Query: 841 gcacccttgaatgcatcggagaaatcaacgacgtaggacacggactc 887
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3031 gcacccttgaatgcatcggagaaatcaacgacgtaggacacggactc 3077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5939
Number of Sequences: 1807
Number of extensions: 5939
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)